TSS: Hg 10071.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=168674 |entrez_id=23261 |gc_percent=0.621891 |gene_alias=CANPMR |gene_description=calmodulin binding transcription activator 1...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=168544 | |||
|end=6953999 | |||
|end_of_center_position=6953999 | |||
|entrez_id=23261 | |entrez_id=23261 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000171735 | |nearest_ensembl=ENSG00000171735 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001349609 | ||
|nearest_refseq=NM_015215 | |nearest_refseq=NM_015215 | ||
|nearest_unigene=Hs.397705 | |nearest_unigene=Hs.397705 | ||
|num_trans=0 | |||
|species=human | |||
|start=6953997 | |||
|start_of_center_position=6953998 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10071.1 | |tss_id=hg_10071.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 15:26, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 168544 |
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Nearest PromoterID: | NM_001349609 |
Entrez ID: | 23261 |
Nearest Unigene: | Hs.397705 |
Nearest Refseq: | NM_015215 |
Nearest Ensembl: | ENSG00000171735 |
Gene Name: | CAMTA1 |
Gene Alias: | CANPMR |
Gene Description: | calmodulin binding transcription activator 1 |
Gene Type: | protein-coding |
CpG%: | 0.025 |
GC%: | 0.621891 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |