TSS: Hg 100715.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=6823 |entrez_id=5079 |gc_percent=0.78607 |gene_alias=ALL3|BSAP |gene_description=paired box 5 |gene_name=PAX5 |gene_type=protei...") |
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{{TSSDetail | {{TSSDetail | ||
|BSAP= | |||
|chr=chr9 | |||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=6612 | |||
|end=37027663 | |||
|end_of_center_position=37027656 | |||
|entrez_id=5079 | |entrez_id=5079 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=ALL3 | |gene_alias=ALL3{{!}}BSAP | ||
|gene_description=paired box 5 | |gene_description=paired box 5 | ||
|gene_name=PAX5 | |gene_name=PAX5 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000196092 | |nearest_ensembl=ENSG00000196092 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001280547 | ||
|nearest_refseq=NM_016734 | |nearest_refseq=NM_016734 | ||
|nearest_unigene=Hs.654464 | |nearest_unigene=Hs.654464 | ||
|num_trans=0 | |||
|species=human | |||
|start=37027648 | |||
|start_of_center_position=37027655 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100715.1 | |tss_id=hg_100715.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:23, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 6612 |
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Nearest PromoterID: | NM_001280547 |
Entrez ID: | 5079 |
Nearest Unigene: | Hs.654464 |
Nearest Refseq: | NM_016734 |
Nearest Ensembl: | ENSG00000196092 |
Gene Name: | PAX5 |
Gene Alias: | ALL3|BSAP |
Gene Description: | paired box 5 |
Gene Type: | protein-coding |
CpG%: | 0.145 |
GC%: | 0.78607 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |