TSS: Hg 100727.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|GLYD= | |||
|PH2= | |||
|all_trans=HGNC:52258 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss=- | |distance=27 | ||
|distance_to_tss=-38230 | |||
|end=37384472 | |||
|end_of_center_position=37384467 | |||
|entrez_id=9380 | |entrez_id=9380 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=GLXR | |gene_alias=GLXR{{!}}GLYD{{!}}PH2 | ||
|gene_description=glyoxylate and hydroxypyruvate reductase | |gene_description=glyoxylate and hydroxypyruvate reductase | ||
|gene_name= | |gene_id= | ||
|gene_name=long intergenic non-protein coding RNA 1627 | |||
|gene_source=HGNC:52258 | |||
|gene_symbol=LINC01627 | |||
|gene_synonyms=RP11-397D12.4 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:52258 | |||
|nearest_ensembl=ENSG00000137106 | |nearest_ensembl=ENSG00000137106 | ||
|nearest_promoter_id=NM_012203 | |nearest_promoter_id=NM_012203 | ||
|nearest_refseq=NM_012203 | |nearest_refseq=NM_012203 | ||
|nearest_unigene=Hs.155742 | |nearest_unigene=Hs.155742 | ||
|num_trans= | |||
|species=human | |||
|start=37384460 | |||
|start_of_center_position=37384466 | |||
|strand=- | |||
|transcript_name=ENST00000452923.1 | |||
|tss_classification=no | |||
|tss_id=hg_100727.1 | |tss_id=hg_100727.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 17:49, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -38230 |
|---|---|
| Nearest PromoterID: | NM_012203 |
| Entrez ID: | 9380 |
| Nearest Unigene: | Hs.155742 |
| Nearest Refseq: | NM_012203 |
| Nearest Ensembl: | ENSG00000137106 |
| Gene Name: | long intergenic non-protein coding RNA 1627 |
| Gene Alias: | GLXR|GLYD|PH2 |
| Gene Description: | glyoxylate and hydroxypyruvate reductase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.