TSS: Hg 10074.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-323428 |entrez_id=9341 |gc_percent=0.532338 |gene_alias=CEB |gene_description=vesicle associated membrane protein 3 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss=- | |distance=NA | ||
|entrez_id= | |distance_to_tss=-58087 | ||
|end=7447845 | |||
|end_of_center_position=7447842 | |||
|entrez_id=102725193 | |||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=uncharacterized LOC102725193 | ||
|gene_name= | |gene_name=LOC102725193 | ||
|gene_type= | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000237728 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_146201 | ||
|nearest_refseq= | |nearest_refseq=NR_146199 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.666120 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=7447837 | |||
|start_of_center_position=7447841 | |||
|strand=- | |||
|tata_box=-34(CACTATAAAAAG,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10074.1 | |tss_id=hg_10074.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 15:26, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -58087 |
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Nearest PromoterID: | NR_146201 |
Entrez ID: | 102725193 |
Nearest Unigene: | Hs.666120 |
Nearest Refseq: | NR_146199 |
Nearest Ensembl: | ENSG00000237728 |
Gene Name: | LOC102725193 |
Gene Alias: | - |
Gene Description: | uncharacterized LOC102725193 |
Gene Type: | ncRNA |
CpG%: | 0.005 |
GC%: | 0.532338 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CACTATAAAAAG,-,0.00) |