TSS: Hg 100745.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PCH1B= | |||
|RRP40= | |||
|Rrp40p= | |||
|all_trans=DQ573522:-237 | |||
|bA3J10.7= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance_to_tss= | |distance=-237 | ||
|distance_to_tss=7871 | |||
|end=37777193 | |||
|end_of_center_position=37777193 | |||
|entrez_id=51010 | |entrez_id=51010 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
|gene_alias=CGI-102 | |gene_alias=CGI-102{{!}}PCH1B{{!}}RRP40{{!}}Rrp40p{{!}}bA3J10.7{{!}}hRrp-40{{!}}p10 | ||
|gene_description=exosome component 3 | |gene_description=exosome component 3 | ||
|gene_name=EXOSC3 | |gene_name=EXOSC3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hRrp-40= | |||
|nearest_ensembl=ENSG00000107371 | |nearest_ensembl=ENSG00000107371 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_016042 | ||
|nearest_refseq=NM_016042 | |nearest_refseq=NM_016042 | ||
|nearest_unigene=Hs.602571 | |nearest_unigene=Hs.602571 | ||
|num_trans=1 | |||
|p10= | |||
|species=human | |||
|start=37777192 | |||
|start_of_center_position=37777192 | |||
|strand=- | |||
|transcript_name=DQ573522 | |||
|tss_classification=no | |||
|tss_id=hg_100745.1 | |tss_id=hg_100745.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:24, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 7871 |
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Nearest PromoterID: | NM_016042 |
Entrez ID: | 51010 |
Nearest Unigene: | Hs.602571 |
Nearest Refseq: | NM_016042 |
Nearest Ensembl: | ENSG00000107371 |
Gene Name: | EXOSC3 |
Gene Alias: | CGI-102|PCH1B|RRP40|Rrp40p|bA3J10.7|hRrp-40|p10 |
Gene Description: | exosome component 3 |
Gene Type: | protein-coding |
CpG%: | 0.015 |
GC%: | 0.41791 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |