TSS: Hg 100166.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ASAH3L= | |ASAH3L= | ||
|all_trans= | |all_trans=HGNC:49783 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 10: | Line 10: | ||
|entrez_id=340485 | |entrez_id=340485 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=ALKCDase2 | |gene_alias=ALKCDase2{{!}}ASAH3L | ||
|gene_description=alkaline ceramidase 2 | |gene_description=alkaline ceramidase 2 | ||
|gene_id= | |gene_id= | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001010887 | |nearest_refseq=NM_001010887 | ||
|nearest_unigene=Hs.41379 | |nearest_unigene=Hs.41379 | ||
|num_trans= | |num_trans= | ||
|species=human | |species=human | ||
|start=19464601 | |start=19464601 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000438342.1 | |transcript_name=ENST00000438342.1 | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_100166.1 | |tss_id=hg_100166.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 17:37, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 55595 |
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| Nearest PromoterID: | NM_001010887 |
| Entrez ID: | 340485 |
| Nearest Unigene: | Hs.41379 |
| Nearest Refseq: | NM_001010887 |
| Nearest Ensembl: | ENSG00000177076 |
| Gene Name: | microtubule associated protein 1 light chain 3 beta pseudogene 1 |
| Gene Alias: | ALKCDase2|ASAH3L |
| Gene Description: | alkaline ceramidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.