TSS: Hg 100213.1: Difference between revisions

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Line 3: Line 3:
|IFNA2B=
|IFNA2B=
|INFA2=
|INFA2=
|all_trans=ENST00000380206.4:0 NM_000605:0 M54886:8 V00544:8 V00549:8 BC104163:22 BC104164:22 BC074936:23 BC074937:23 KJ891428:67 JN591568:67 JN591569:67 JN591570:67 JN848522:67 KY780371:67 LQ884075:67 MP518003:67 AB590747:67 CR541921:67 V00548:85 AY255838:136
|all_trans=HGNC:5423
|chr=chr9
|chr=chr9
|cpg_percent=0.005
|cpg_percent=0.005
Line 12: Line 12:
|entrez_id=3440
|entrez_id=3440
|gc_percent=0.442786
|gc_percent=0.442786
|gene_alias=IFN-alphaA|IFNA|IFNA2B|INFA2
|gene_alias=IFN-alphaA{{!}}IFNA{{!}}IFNA2B{{!}}INFA2
|gene_description=interferon alpha 2
|gene_description=interferon alpha 2
|gene_id=3440
|gene_id=3440
Line 25: Line 25:
|nearest_refseq=NM_000605
|nearest_refseq=NM_000605
|nearest_unigene=Hs.211575
|nearest_unigene=Hs.211575
|num_trans=21
|num_trans=3440
|species=human
|species=human
|start=21385395
|start=21385395
Line 31: Line 31:
|strand=-
|strand=-
|tata_box=-35(CCCTATTTAAGG,-,0.00)
|tata_box=-35(CCCTATTTAAGG,-,0.00)
|transcript_name=ENST00000380206.4 NM_000605
|transcript_name=ENST00000380206.4
|tss_classification=no
|tss_classification=no
|tss_id=hg_100213.1
|tss_id=hg_100213.1

Latest revision as of 17:38, 19 July 2021

Basic information about the TSS


TSS ID:hg_100213.1
Species:human
Chr:chr9
Start:21385395
End:21385398
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000380206.4
Distance:0
GeneID:3440
HGNC/MGI_ID:HGNC:5423
UniProt_ID:P01563
Gene_name:interferon alpha 2
Gene_symbol:IFNA2
Gene_synonyms:IFN-alphaA IFNA
Gene_source:HGNC:5423



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_000605
Entrez ID:3440
Nearest Unigene:Hs.211575
Nearest Refseq:NM_000605
Nearest Ensembl:ENSG00000188379
Gene Name:interferon alpha 2
Gene Alias:IFN-alphaA|IFNA|IFNA2B|INFA2
Gene Description:interferon alpha 2
Gene Type:protein-coding
CpG%:0.005
GC%:0.442786
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-35(CCCTATTTAAGG,-,0.00)



TSS expression

Expression data not found.