TSS: Hg 10035.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:16005 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_019089 | |nearest_refseq=NM_019089 | ||
|nearest_unigene=Hs.118727 | |nearest_unigene=Hs.118727 | ||
|num_trans= | |num_trans=54626 | ||
|species=human | |species=human | ||
|start=6419908 | |start=6419908 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=-35(CTCCCTTAAAGC,-,0.00) | |tata_box=-35(CTCCCTTAAAGC,-,0.00) | ||
|transcript_name=ENST00000377834.8 ENST00000489730.1 | |transcript_name=ENST00000377834.8 ENST00000489730.1 AK091122 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10035.1 | |tss_id=hg_10035.1 | ||
Latest revision as of 17:41, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_019089 |
| Entrez ID: | 54626 |
| Nearest Unigene: | Hs.118727 |
| Nearest Refseq: | NM_019089 |
| Nearest Ensembl: | ENSG00000069812 |
| Gene Name: | hes family bHLH transcription factor 2 |
| Gene Alias: | bHLHb40 |
| Gene Description: | hes family bHLH transcription factor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTCCCTTAAAGC,-,0.00) |
TSS expression
Expression data not found.