TSS: Hg 100750.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=16781 |entrez_id=92014 |gc_percent=0.383085 |gene_alias=CG7943|MCART1 |gene_description=solute carrier family 25 member 51 |gene_na...") |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MCART1= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=16555 | |||
|end=37887576 | |||
|end_of_center_position=37887572 | |||
|entrez_id=92014 | |entrez_id=92014 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
|gene_alias=CG7943 | |gene_alias=CG7943{{!}}MCART1 | ||
|gene_description=solute carrier family 25 member 51 | |gene_description=solute carrier family 25 member 51 | ||
|gene_name=SLC25A51 | |gene_name=SLC25A51 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000122696 | |nearest_ensembl=ENSG00000122696 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_033412 | ||
|nearest_refseq=NM_033412 | |nearest_refseq=NM_033412 | ||
|nearest_unigene=Hs.634120 | |nearest_unigene=Hs.634120 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=37887567 | |||
|start_of_center_position=37887571 | |||
|strand=- | |||
|tata_box=-7(TTTTTTAAAGGA,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100750.1 | |tss_id=hg_100750.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:24, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 16555 |
---|---|
Nearest PromoterID: | NM_033412 |
Entrez ID: | 92014 |
Nearest Unigene: | Hs.634120 |
Nearest Refseq: | NM_033412 |
Nearest Ensembl: | ENSG00000122696 |
Gene Name: | SLC25A51 |
Gene Alias: | CG7943|MCART1 |
Gene Description: | solute carrier family 25 member 51 |
Gene Type: | protein-coding |
CpG%: | 0 |
GC%: | 0.383085 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(TTTTTTAAAGGA,+,0.00) |