TSS: Hg 100757.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|MCART1= | |||
|all_trans=BC025343:-173 BC042126:-173 BC021061:-173 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-173 | |||
|distance_to_tss=-7608 | |distance_to_tss=-7608 | ||
|end=37911968 | |||
|end_of_center_position=37911962 | |||
|entrez_id=92014 | |entrez_id=92014 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=CG7943 | |gene_alias=CG7943{{!}}MCART1 | ||
|gene_description=solute carrier family 25 member 51 | |gene_description=solute carrier family 25 member 51 | ||
|gene_name=SLC25A51 | |gene_name=SLC25A51 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_033412 | |nearest_refseq=NM_033412 | ||
|nearest_unigene=Hs.634120 | |nearest_unigene=Hs.634120 | ||
|tata_box= | |num_trans=3 | ||
|species=human | |||
|start=37911954 | |||
|start_of_center_position=37911961 | |||
|strand=- | |||
|tata_box=53(ACCTTTAAAGAC,+,0.00) | |||
|transcript_name=BC025343 BC042126 BC021061 | |||
|tss_classification=no | |||
|tss_id=hg_100757.1 | |tss_id=hg_100757.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:24, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -7608 |
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| Nearest PromoterID: | NR_024873 |
| Entrez ID: | 92014 |
| Nearest Unigene: | Hs.634120 |
| Nearest Refseq: | NM_033412 |
| Nearest Ensembl: | ENSG00000122696 |
| Gene Name: | SLC25A51 |
| Gene Alias: | CG7943|MCART1 |
| Gene Description: | solute carrier family 25 member 51 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 53(ACCTTTAAAGAC,+,0.00) |