TSS: Hg 100773.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=10100 |entrez_id=347252 |gc_percent=0.547264 |gene_alias=IGFBP-RP4|IGFBPRP4|bA113O24.1 |gene_description=insulin like growth fa...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|IGFBPRP4= | |||
|bA113O24.1= | |||
|chr=chr9 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=10107 | |||
|end=38414357 | |||
|end_of_center_position=38414348 | |||
|entrez_id=347252 | |entrez_id=347252 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=IGFBP-RP4 | |gene_alias=IGFBP-RP4{{!}}IGFBPRP4{{!}}bA113O24.1 | ||
|gene_description=insulin like growth factor binding protein like 1 | |gene_description=insulin like growth factor binding protein like 1 | ||
|gene_name=IGFBPL1 | |gene_name=IGFBPL1 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_001007563 | |nearest_refseq=NM_001007563 | ||
|nearest_unigene=Hs.349705 | |nearest_unigene=Hs.349705 | ||
|num_trans=0 | |||
|species=human | |||
|start=38414337 | |||
|start_of_center_position=38414347 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100773.1 | |tss_id=hg_100773.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:25, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 10107 |
|---|---|
| Nearest PromoterID: | NM_001007563 |
| Entrez ID: | 347252 |
| Nearest Unigene: | Hs.349705 |
| Nearest Refseq: | NM_001007563 |
| Nearest Ensembl: | ENSG00000137142 |
| Gene Name: | IGFBPL1 |
| Gene Alias: | IGFBP-RP4|IGFBPRP4|bA113O24.1 |
| Gene Description: | insulin like growth factor binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |