TSS: Hg 100784.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000639363.1:-3 ENST00000640245.1:-53 | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=-3 | |||
|distance_to_tss=-116679 | |distance_to_tss=-116679 | ||
|end=40106608 | |||
|end_of_center_position=40106606 | |||
|entrez_id=441430 | |entrez_id=441430 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001012421 | |nearest_refseq=NM_001012421 | ||
|nearest_unigene=Hs.632663 | |nearest_unigene=Hs.632663 | ||
|num_trans=2 | |||
|species=human | |||
|start=40106603 | |||
|start_of_center_position=40106605 | |||
|strand=- | |||
|transcript_name=ENST00000639363.1 | |||
|tss_classification=yes | |||
|tss_id=hg_100784.1 | |tss_id=hg_100784.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:28, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -116679 |
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| Nearest PromoterID: | NM_001012421 |
| Entrez ID: | 441430 |
| Nearest Unigene: | Hs.632663 |
| Nearest Refseq: | NM_001012421 |
| Nearest Ensembl: | ENSG00000183148 |
| Gene Name: | ANKRD20A2 |
| Gene Alias: | - |
| Gene Description: | ankyrin repeat domain 20 family member A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |