TSS: Hg 100785.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NR_002836:349 ENST00000613141.1:357 BC007887:357 BC025351:357 | |||
|chr=chr9 | |||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=349 | |||
|distance_to_tss=-358 | |distance_to_tss=-358 | ||
|end=41074992 | |||
|end_of_center_position=41074983 | |||
|entrez_id=595135 | |entrez_id=595135 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=phosphoglucomutase 5 pseudogene 2 | |gene_description=phosphoglucomutase 5 pseudogene 2 | ||
|gene_name=PGM5P2 | |gene_id=595135 | ||
|gene_name=phosphoglucomutase 5 pseudogene 2 | |||
|gene_source=HGNC:18965 | |||
|gene_symbol=PGM5P2 | |||
|gene_synonyms=AK096159 | |||
|gene_type=pseudo | |gene_type=pseudo | ||
|hgnc_mgi_id=HGNC:18965 | |||
|nearest_ensembl=ENSG00000277778 | |nearest_ensembl=ENSG00000277778 | ||
|nearest_promoter_id=NR_002836 | |nearest_promoter_id=NR_002836 | ||
|nearest_refseq=NR_002836 | |nearest_refseq=NR_002836 | ||
|nearest_unigene=Hs.571593 | |nearest_unigene=Hs.571593 | ||
|num_trans=4 | |||
|species=human | |||
|start=41074973 | |||
|start_of_center_position=41074982 | |||
|strand=- | |||
|transcript_name=NR_002836.2 | |||
|tss_classification=yes | |||
|tss_id=hg_100785.1 | |tss_id=hg_100785.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 17:51, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -358 |
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| Nearest PromoterID: | NR_002836 |
| Entrez ID: | 595135 |
| Nearest Unigene: | Hs.571593 |
| Nearest Refseq: | NR_002836 |
| Nearest Ensembl: | ENSG00000277778 |
| Gene Name: | phosphoglucomutase 5 pseudogene 2 |
| Gene Alias: | - |
| Gene Description: | phosphoglucomutase 5 pseudogene 2 |
| Gene Type: | pseudo |
| CpG%: | 0.065 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.