TSS: Hg 100802.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=54384 |entrez_id=116224 |gc_percent=0.507463 |gene_alias=C9orf42 |gene_description=family with sequence similarity 122A |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=54325 | |||
|end=68834392 | |||
|end_of_center_position=68834390 | |||
|entrez_id=116224 | |entrez_id=116224 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_138333 | |nearest_refseq=NM_138333 | ||
|nearest_unigene=Hs.655572 | |nearest_unigene=Hs.655572 | ||
|num_trans=0 | |||
|species=human | |||
|start=68834387 | |||
|start_of_center_position=68834389 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100802.1 | |tss_id=hg_100802.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:28, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 54325 |
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| Nearest PromoterID: | NM_138333 |
| Entrez ID: | 116224 |
| Nearest Unigene: | Hs.655572 |
| Nearest Refseq: | NM_138333 |
| Nearest Ensembl: | ENSG00000187866 |
| Gene Name: | FAM122A |
| Gene Alias: | C9orf42 |
| Gene Description: | family with sequence similarity 122A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |