TSS: Hg 164699.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=ENST00000455584.2:75 AB209899:75 AK314557:82 AK002035:96 AF096870:-98 HQ257965:119 KJ898262:119 EU446937:119 CR457136:119 BC001564:232
|all_trans=
|chr=chr17
|chr=chr17
|cpg_percent=0.025
|cpg_percent=0.025
Line 22: Line 22:
|nearest_refseq=NM_006470
|nearest_refseq=NM_006470
|nearest_unigene=Hs.123534
|nearest_unigene=Hs.123534
|num_trans=10
|num_trans=
|species=human
|species=human
|start=15651727
|start=15651727

Latest revision as of 17:02, 20 July 2021

Basic information about the TSS


TSS ID:hg_164699.1
Species:human
Chr:chr17
Start:15651727
End:15651738
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000455584.2 AB209899
Distance:75
GeneID:
HGNC/MGI_ID:
UniProt_ID:H0Y626 Q59EB2
Gene_name:TRIM16
Gene_symbol:CDRT1
Gene_synonyms:FBXW10B HREP SM25H2
Gene_source:HGNC:14379



TATA-Box annotation


Distance to TSS:31218
Nearest PromoterID:NM_006470
Entrez ID:10626
Nearest Unigene:Hs.123534
Nearest Refseq:NM_006470
Nearest Ensembl:ENSG00000221926
Gene Name:TRIM16
Gene Alias:EBBP
Gene Description:tripartite motif containing 16
Gene Type:protein-coding
CpG%:0.025
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.