TSS: Hg 100830.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=HGNC:48713 | |||
|chr=chr9 | |||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |||
|distance_to_tss=61 | |distance_to_tss=61 | ||
|end=69820695 | |||
|end_of_center_position=69820678 | |||
|entrez_id=494558 | |entrez_id=494558 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=- | |gene_alias=C9orf135-AS1 | ||
|gene_description=C9orf135 | |gene_description=C9orf135 divergent transcript | ||
|gene_name=C9orf135- | |gene_id=494558 | ||
|gene_name=C9orf135 divergent transcript | |||
|gene_source=HGNC:48713 | |||
|gene_symbol=C9orf135-DT | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |hgnc_mgi_id=HGNC:48713 | ||
|nearest_ensembl=ENSG00000225626 | |||
|nearest_promoter_id=NR_038833 | |nearest_promoter_id=NR_038833 | ||
|nearest_refseq=NR_038833 | |nearest_refseq=NR_038833 | ||
|nearest_unigene=Hs.130722 | |nearest_unigene=Hs.130722 | ||
|num_trans=494558 | |||
|species=human | |||
|start=69820660 | |||
|start_of_center_position=69820677 | |||
|strand=- | |||
|transcript_name=ENST00000662063.1 ENST00000453410.1 ENST00000652595.1 ENST00000526458.1 BC039385 | |||
|tss_classification=yes | |||
|tss_id=hg_100830.1 | |tss_id=hg_100830.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} |
Latest revision as of 17:52, 19 July 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 61 |
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Nearest PromoterID: | NR_038833 |
Entrez ID: | 494558 |
Nearest Unigene: | Hs.130722 |
Nearest Refseq: | NR_038833 |
Nearest Ensembl: | ENSG00000225626 |
Gene Name: | C9orf135 divergent transcript |
Gene Alias: | C9orf135-AS1 |
Gene Description: | C9orf135 divergent transcript |
Gene Type: | ncRNA |
CpG%: | 0.055 |
GC%: | 0.577114 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.