TSS: Hg 184667.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000373077.5:0 uc010ggm.4:0 AK308502:0 ENST00000373092.7:9 ENST00000496343.5:9 uc002xkr.4:9 uc061xdn.1:9 NM_170693:-22 BC006523:33 ENST00000373100....") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:10812 HGNC:13900 | ||
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|dJ138B7.2= | |||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=-2 | ||
|end=43559033 | |end=43559033 | ||
|end_of_center_position=43559025 | |||
|entrez_id=10110 | |entrez_id=10110 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=H-SGK2 | |gene_alias=H-SGK2{{!}}dJ138B7.2 | ||
|gene_description= | |gene_description=serum/glucocorticoid regulated kinase 2 | ||
|gene_id=10110 | |gene_id=10110 | ||
|gene_name=serum/glucocorticoid regulated kinase 2 | |gene_name=serum/glucocorticoid regulated kinase 2; serum/glucocorticoid regulated kinase family member 3 | ||
|gene_source=HGNC:13900 | |gene_source=HGNC:10812 HGNC:13900 | ||
|gene_symbol=SGK2 | |gene_symbol=SGK2 SGK3 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:13900 | |hgnc_mgi_id=HGNC:10812 HGNC:13900 | ||
|nearest_ensembl=ENSG00000101049 | |nearest_ensembl=ENSG00000101049 | ||
|nearest_promoter_id=NM_170693 | |nearest_promoter_id=NM_170693 | ||
|nearest_refseq=NM_016276 | |nearest_refseq=NM_016276 | ||
|nearest_unigene=Hs.300863 | |nearest_unigene=Hs.300863 | ||
|num_trans= | |num_trans=10110 | ||
|species=human | |species=human | ||
|start=43559016 | |start=43559016 | ||
|start_of_center_position=43559024 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=ENST00000373100.7 ENST00000648083.1 AK308502 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_184667.1 | |tss_id=hg_184667.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=A0A3B3IRX6 Q9HBY8 | ||
}} | }} | ||
Latest revision as of 00:17, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2 |
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| Nearest PromoterID: | NM_170693 |
| Entrez ID: | 10110 |
| Nearest Unigene: | Hs.300863 |
| Nearest Refseq: | NM_016276 |
| Nearest Ensembl: | ENSG00000101049 |
| Gene Name: | serum/glucocorticoid regulated kinase 2; serum/glucocorticoid regulated kinase family member 3 |
| Gene Alias: | H-SGK2|dJ138B7.2 |
| Gene Description: | serum/glucocorticoid regulated kinase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.