TSS: Hg 233025.1: Difference between revisions
From referenceTSS
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|UV-DDB2= | |UV-DDB2= | ||
|XPE= | |XPE= | ||
|all_trans= | |all_trans=HGNC:31991 | ||
|chr= | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=126 | |distance=126 | ||
|distance_to_tss=-272 | |distance_to_tss=-272 | ||
|end= | |end=149077370 | ||
|end_of_center_position=149077370 | |end_of_center_position=149077370 | ||
|entrez_id=1643 | |entrez_id=1643 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_000107 | |nearest_refseq=NM_000107 | ||
|nearest_unigene=Hs.700338 | |nearest_unigene=Hs.700338 | ||
|num_trans= | |num_trans=400818 | ||
|species=human | |species=human | ||
|start= | |start=149077369 | ||
|start_of_center_position=149077369 | |start_of_center_position=149077369 | ||
|strand= | |strand=- | ||
|transcript_name=BC071995 BC094841 | |transcript_name=BC071995 BC094841 | ||
|tss_classification= | |tss_classification=no | ||
|tss_id=hg_233025.1 | |tss_id=hg_233025.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:23, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -272 |
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| Nearest PromoterID: | NM_001300734 |
| Entrez ID: | 1643 |
| Nearest Unigene: | Hs.700338 |
| Nearest Refseq: | NM_000107 |
| Nearest Ensembl: | ENSG00000134574 |
| Gene Name: | NBPF member 9 |
| Gene Alias: | DDBB|UV-DDB2|XPE |
| Gene Description: | damage specific DNA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.