TSS: Hg 100912.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LTRPC3= | |||
|MLSN2= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|entrez_id= | |distance_to_tss=-105790 | ||
|end=71552771 | |||
|end_of_center_position=71552762 | |||
|entrez_id=80036 | |||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=- | |gene_alias=GON-2{{!}}LTRPC3{{!}}MLSN2 | ||
|gene_description= | |gene_description=transient receptor potential cation channel subfamily M member 3 | ||
|gene_name= | |gene_name=TRPM3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000083067 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001366144 | ||
|nearest_refseq= | |nearest_refseq=NM_020952 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.47288 | ||
|num_trans=0 | |||
|species=human | |||
|start=71552751 | |||
|start_of_center_position=71552761 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100912.1 | |tss_id=hg_100912.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:28, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -105790 |
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| Nearest PromoterID: | NM_001366144 |
| Entrez ID: | 80036 |
| Nearest Unigene: | Hs.47288 |
| Nearest Refseq: | NM_020952 |
| Nearest Ensembl: | ENSG00000083067 |
| Gene Name: | TRPM3 |
| Gene Alias: | GON-2|LTRPC3|MLSN2 |
| Gene Description: | transient receptor potential cation channel subfamily M member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |