TSS: Hg 100921.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=28106 | |||
|end=71740417 | |||
|end_of_center_position=71740408 | |||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
|gene_alias= | |gene_alias=TMEM2 | ||
|gene_description= | |gene_description=cell migration inducing hyaluronidase 2 | ||
|gene_name= | |gene_name=CEMIP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=71740397 | |||
|start_of_center_position=71740407 | |||
|strand=- | |||
|tata_box=-27(GTATTTAAAAAG,-,0.00),38(CCTCATATAGAA,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100921.1 | |tss_id=hg_100921.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 28106 |
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Nearest PromoterID: | NM_001135820 |
Entrez ID: | 23670 |
Nearest Unigene: | Hs.494146 |
Nearest Refseq: | NM_013390 |
Nearest Ensembl: | ENSG00000135048 |
Gene Name: | CEMIP2 |
Gene Alias: | TMEM2 |
Gene Description: | cell migration inducing hyaluronidase 2 |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.363184 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -27(GTATTTAAAAAG,-,0.00),38(CCTCATATAGAA,+,0.00) |