TSS: Hg 100925.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=16317 |entrez_id=23670 |gc_percent=0.462687 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF345180:-148 MA580757:-148 LF345181:259 MA580758:259 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance_to_tss= | |distance=-148 | ||
|distance_to_tss=15946 | |||
|end=71752574 | |||
|end_of_center_position=71752567 | |||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias= | |gene_alias=TMEM2 | ||
|gene_description= | |gene_description=cell migration inducing hyaluronidase 2 | ||
|gene_name= | |gene_name=CEMIP2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
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|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
|num_trans=4 | |||
|species=human | |||
|start=71752559 | |||
|start_of_center_position=71752566 | |||
|strand=- | |||
|transcript_name=LF345180 MA580757 | |||
|tss_classification=no | |||
|tss_id=hg_100925.1 | |tss_id=hg_100925.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 15946 |
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| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | CEMIP2 |
| Gene Alias: | TMEM2 |
| Gene Description: | cell migration inducing hyaluronidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |