TSS: Hg 8085.1: Difference between revisions
From referenceTSS
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|IKKE= | |IKKE= | ||
|IKKI= | |IKKI= | ||
|all_trans= | |all_trans=HGNC:14552 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_014002 | |nearest_refseq=NM_014002 | ||
|nearest_unigene=Hs.321045 | |nearest_unigene=Hs.321045 | ||
|num_trans= | |num_trans=9641 | ||
|species=human | |species=human | ||
|start=206470463 | |start=206470463 | ||
| Line 31: | Line 31: | ||
|strand=+ | |strand=+ | ||
|tata_box=-81(GTCTCTTTAAGA,-,0.00),-78(TCTTTAAGAGAG,+,0.00) | |tata_box=-81(GTCTCTTTAAGA,-,0.00),-78(TCTTTAAGAGAG,+,0.00) | ||
|transcript_name=ENST00000605818.5 ENST00000581977.7 ENST00000578328.6 ENST00000584998.5 | |transcript_name=ENST00000605818.5 ENST00000581977.7 ENST00000578328.6 ENST00000584998.5 AK310737 AK093798 AY660028 BC105924 BC105923 BC107591 BC107812 D63485 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_8085.1 | |tss_id=hg_8085.1 | ||
Latest revision as of 11:48, 22 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 9 |
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| Nearest PromoterID: | NM_001193322 |
| Entrez ID: | 9641 |
| Nearest Unigene: | Hs.321045 |
| Nearest Refseq: | NM_014002 |
| Nearest Ensembl: | ENSG00000263528 |
| Gene Name: | inhibitor of nuclear factor kappa B kinase subunit epsilon |
| Gene Alias: | IKK-E|IKK-i|IKKE|IKKI |
| Gene Description: | inhibitor of nuclear factor kappa B kinase subunit epsilon |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -81(GTCTCTTTAAGA,-,0.00),-78(TCTTTAAGAGAG,+,0.00) |
TSS expression
Expression data not found.