TSS: Hg 100979.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=36247 |entrez_id=216 |gc_percent=0.373134 |gene_alias=ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 |gene_descrip...") |
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{{TSSDetail | {{TSSDetail | ||
|ALDH-E1= | |||
|ALDH1= | |||
|ALDH11= | |||
|HEL-9= | |||
|HEL-S-53e= | |||
|HEL12= | |||
|PUMB1= | |||
|RALDH1= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=35983 | |||
|end=72917079 | |||
|end_of_center_position=72917071 | |||
|entrez_id=216 | |entrez_id=216 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
|gene_alias=ALDC | |gene_alias=ALDC{{!}}ALDH-E1{{!}}ALDH1{{!}}ALDH11{{!}}HEL-9{{!}}HEL-S-53e{{!}}HEL12{{!}}PUMB1{{!}}RALDH1 | ||
|gene_description=aldehyde dehydrogenase 1 family member A1 | |gene_description=aldehyde dehydrogenase 1 family member A1 | ||
|gene_name=ALDH1A1 | |gene_name=ALDH1A1 | ||
| Line 12: | Line 24: | ||
|nearest_refseq=NM_000689 | |nearest_refseq=NM_000689 | ||
|nearest_unigene=Hs.76392 | |nearest_unigene=Hs.76392 | ||
|num_trans=0 | |||
|species=human | |||
|start=72917061 | |||
|start_of_center_position=72917070 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100979.1 | |tss_id=hg_100979.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:29, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 35983 |
|---|---|
| Nearest PromoterID: | NM_000689 |
| Entrez ID: | 216 |
| Nearest Unigene: | Hs.76392 |
| Nearest Refseq: | NM_000689 |
| Nearest Ensembl: | ENSG00000165092 |
| Gene Name: | ALDH1A1 |
| Gene Alias: | ALDC|ALDH-E1|ALDH1|ALDH11|HEL-9|HEL-S-53e|HEL12|PUMB1|RALDH1 |
| Gene Description: | aldehyde dehydrogenase 1 family member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |