TSS: Hg 10098.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-49534 |entrez_id=54206 |gc_percent=0.502488 |gene_alias=GENE-33|MIG-6|MIG6|RALT |gene_description=ERBB receptor feedback inhibi...") |
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{{TSSDetail | {{TSSDetail | ||
|MIG-6= | |||
|MIG6= | |||
|RALT= | |||
|chr=chr1 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-49558 | |||
|end=8075869 | |||
|end_of_center_position=8075868 | |||
|entrez_id=54206 | |entrez_id=54206 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=GENE-33 | |gene_alias=GENE-33{{!}}MIG-6{{!}}MIG6{{!}}RALT | ||
|gene_description=ERBB receptor feedback inhibitor 1 | |gene_description=ERBB receptor feedback inhibitor 1 | ||
|gene_name=ERRFI1 | |gene_name=ERRFI1 | ||
Line 12: | Line 19: | ||
|nearest_refseq=NM_018948 | |nearest_refseq=NM_018948 | ||
|nearest_unigene=Hs.605445 | |nearest_unigene=Hs.605445 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=8075865 | |||
|start_of_center_position=8075867 | |||
|strand=- | |||
|tata_box=-35(GGGTATAAAAAC,-,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10098.1 | |tss_id=hg_10098.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:29, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -49558 |
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Nearest PromoterID: | NM_018948 |
Entrez ID: | 54206 |
Nearest Unigene: | Hs.605445 |
Nearest Refseq: | NM_018948 |
Nearest Ensembl: | ENSG00000116285 |
Gene Name: | ERRFI1 |
Gene Alias: | GENE-33|MIG-6|MIG6|RALT |
Gene Description: | ERBB receptor feedback inhibitor 1 |
Gene Type: | protein-coding |
CpG%: | 0.02 |
GC%: | 0.502488 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GGGTATAAAAAC,-,0.00) |