TSS: Mm 154284.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=ENSMUST00000080806.9:0 ENSMUST00000124921.1:0 NM_053198:0 NM_001362384:0 NM_001362385:0 BC058211:0 AK148530:0 BC089535:0 ENSMUST00000135808.7:-17 AF325263:27
|all_trans=MGI:2137680
|chr=chr19
|chr=chr19
|cpg_percent=0.06
|cpg_percent=0.06
Line 22: Line 22:
|nearest_refseq=NM_053198
|nearest_refseq=NM_053198
|nearest_unigene=Mm.48179
|nearest_unigene=Mm.48179
|num_trans=10
|num_trans=94281
|species=mouse
|species=mouse
|start=60861390
|start=60861390
|start_of_center_position=60861426
|start_of_center_position=60861426
|strand=-
|strand=-
|transcript_name=ENSMUST00000080806.9 ENSMUST00000124921.1 NM_053198 NM_001362384 NM_001362385 BC058211 AK148530 BC089535
|transcript_name=ENSMUST00000080806.9 ENSMUST00000124921.1 BC058211 AK148530 BC089535
|tss_classification=no
|tss_classification=no
|tss_id=mm_154284.1
|tss_id=mm_154284.1

Latest revision as of 06:24, 27 July 2021

Basic information about the TSS


TSS ID:mm_154284.1
Species:mouse
Chr:chr19
Start:60861390
End:60861462
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:ENSMUST00000080806.9 ENSMUST00000124921.1 BC058211 AK148530 BC089535
Distance:0
GeneID:94281
HGNC/MGI_ID:MGI:2137680
UniProt_ID:D6RHK7 F8WI63 Q925N1
Gene_name:sideroflexin 4
Gene_symbol:Sfxn4
Gene_synonyms:
Gene_source:MGI:2137680



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_001362384
Entrez ID:94281
Nearest Unigene:Mm.48179
Nearest Refseq:NM_053198
Nearest Ensembl:ENSMUSG00000063698
Gene Name:sideroflexin 4
Gene Alias:-
Gene Description:sideroflexin 4
Gene Type:protein-coding
CpG%:0.06
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.