TSS: Hg 101017.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=65576 |entrez_id=140803 |gc_percent=0.577114 |gene_alias=CHAK2|HMGX|HOMG|HOMG1|HSH |gene_description=transient receptor potentia...") |
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{{TSSDetail | {{TSSDetail | ||
|HMGX= | |||
|HOMG= | |||
|HOMG1= | |||
|HSH= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=NA | |||
|distance_to_tss=65576 | |distance_to_tss=65576 | ||
|end=74821787 | |||
|end_of_center_position=74821771 | |||
|entrez_id=140803 | |entrez_id=140803 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=CHAK2 | |gene_alias=CHAK2{{!}}HMGX{{!}}HOMG{{!}}HOMG1{{!}}HSH | ||
|gene_description=transient receptor potential cation channel subfamily M member 6 | |gene_description=transient receptor potential cation channel subfamily M member 6 | ||
|gene_name=TRPM6 | |gene_name=TRPM6 | ||
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|nearest_refseq=NM_017662 | |nearest_refseq=NM_017662 | ||
|nearest_unigene=Hs.272225 | |nearest_unigene=Hs.272225 | ||
|num_trans=0 | |||
|species=human | |||
|start=74821754 | |||
|start_of_center_position=74821770 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101017.1 | |tss_id=hg_101017.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:30, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 65576 |
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| Nearest PromoterID: | NM_001177311 |
| Entrez ID: | 140803 |
| Nearest Unigene: | Hs.272225 |
| Nearest Refseq: | NM_017662 |
| Nearest Ensembl: | ENSG00000119121 |
| Gene Name: | TRPM6 |
| Gene Alias: | CHAK2|HMGX|HOMG|HOMG1|HSH |
| Gene Description: | transient receptor potential cation channel subfamily M member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |