TSS: Hg 101043.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=71148 |entrez_id=2650 |gc_percent=0.631841 |gene_alias=C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 |gene_description="glucosaminyl (...") |
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{{TSSDetail | {{TSSDetail | ||
|C2GNT-L= | |||
|C2GNT1= | |||
|G6NT= | |||
|NACGT2= | |||
|NAGCT2= | |||
|chr=chr9 | |||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=NA | |||
|distance_to_tss=71148 | |distance_to_tss=71148 | ||
|end=76571797 | |||
|end_of_center_position=76571781 | |||
|entrez_id=2650 | |entrez_id=2650 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=C2GNT | |gene_alias=C2GNT{{!}}C2GNT-L{{!}}C2GNT1{{!}}G6NT{{!}}NACGT2{{!}}NAGCT2 | ||
|gene_description= | |gene_description=glucosaminyl (N-acetyl) transferase 1 | ||
|gene_name=GCNT1 | |gene_name=GCNT1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 21: | ||
|nearest_refseq=NM_001490 | |nearest_refseq=NM_001490 | ||
|nearest_unigene=Hs.521568 | |nearest_unigene=Hs.521568 | ||
|num_trans=0 | |||
|species=human | |||
|start=76571764 | |||
|start_of_center_position=76571780 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101043.1 | |tss_id=hg_101043.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:31, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 71148 |
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| Nearest PromoterID: | NM_001097636 |
| Entrez ID: | 2650 |
| Nearest Unigene: | Hs.521568 |
| Nearest Refseq: | NM_001490 |
| Nearest Ensembl: | ENSG00000187210 |
| Gene Name: | GCNT1 |
| Gene Alias: | C2GNT|C2GNT-L|C2GNT1|G6NT|NACGT2|NAGCT2 |
| Gene Description: | glucosaminyl (N-acetyl) transferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |