TSS: Hg 223192.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000442437.2:-1 uc033edf.2:-1 NM_001098406:-28 AK310423:-28 NM_001127199:-32 |chr=chrX |cpg_percent=0.06 |distance=-1 |distance_to_tss=28 |end=4932...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:17778 | ||
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=-1 | |distance=-1 | ||
|distance_to_tss= | |distance_to_tss=24 | ||
|end=49322058 | |end=49322058 | ||
|entrez_id= | |end_of_center_position=49322058 | ||
|entrez_id=645073 | |||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
|gene_alias= | |gene_alias=AL4{{!}}CT4.7{{!}}GAGE-12G | ||
|gene_description=G antigen | |gene_description=G antigen 12G | ||
|gene_id=729396 | |gene_id=729396 | ||
|gene_name=G antigen 12J | |gene_name=G antigen 12J | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:17778 | |hgnc_mgi_id=HGNC:17778 | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000215269 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001098409 | ||
|nearest_refseq= | |nearest_refseq=NM_001098409 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.460641 | ||
|num_trans= | |num_trans=729396 | ||
|species=human | |species=human | ||
|start=49322057 | |start=49322057 | ||
|start_of_center_position=49322057 | |||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000442437 | |transcript_name=ENST00000442437.2 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_223192.1 | |tss_id=hg_223192.1 | ||
Latest revision as of 07:57, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 24 |
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| Nearest PromoterID: | NM_001098409 |
| Entrez ID: | 645073 |
| Nearest Unigene: | Hs.460641 |
| Nearest Refseq: | NM_001098409 |
| Nearest Ensembl: | ENSG00000215269 |
| Gene Name: | G antigen 12J |
| Gene Alias: | AL4|CT4.7|GAGE-12G |
| Gene Description: | G antigen 12G |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.