TSS: Hg 101057.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=4986 |entrez_id=158471 |gc_percent=0.502488 |gene_alias=BMCC1|BNIPXL|C9orf65|KIAA0367 |gene_description=prune homolog 2 |gene_na...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|BNIPXL= | |||
|C9orf65= | |||
|KIAA0367= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=4986 | |distance_to_tss=4986 | ||
|end=76901106 | |||
|end_of_center_position=76901101 | |||
|entrez_id=158471 | |entrez_id=158471 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias=BMCC1 | |gene_alias=BMCC1{{!}}BNIPXL{{!}}C9orf65{{!}}KIAA0367 | ||
|gene_description=prune homolog 2 | |gene_description=prune homolog 2 with BCH domain | ||
|gene_name=PRUNE2 | |gene_name=PRUNE2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000106772 | |nearest_ensembl=ENSG00000106772 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_131751 | ||
|nearest_refseq=NM_015225 | |nearest_refseq=NM_015225 | ||
|nearest_unigene=Hs.262857 | |nearest_unigene=Hs.262857 | ||
|num_trans=0 | |||
|species=human | |||
|start=76901095 | |||
|start_of_center_position=76901100 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101057.1 | |tss_id=hg_101057.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:31, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 4986 |
|---|---|
| Nearest PromoterID: | NR_131751 |
| Entrez ID: | 158471 |
| Nearest Unigene: | Hs.262857 |
| Nearest Refseq: | NM_015225 |
| Nearest Ensembl: | ENSG00000106772 |
| Gene Name: | PRUNE2 |
| Gene Alias: | BMCC1|BNIPXL|C9orf65|KIAA0367 |
| Gene Description: | prune homolog 2 with BCH domain |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |