TSS: Mm 65297.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:3615324 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001037143 | |nearest_refseq=NM_001037143 | ||
|nearest_unigene=Mm.333661 | |nearest_unigene=Mm.333661 | ||
|num_trans= | |num_trans=641361 | ||
|species=mouse | |species=mouse | ||
|start=24545994 | |start=24545994 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=-34(CTTCTTATAAGG,-,0.00),-32(TCTTATAAGGGC,+,0.00) | |tata_box=-34(CTTCTTATAAGG,-,0.00),-32(TCTTATAAGGGC,+,0.00) | ||
|transcript_name= | |transcript_name=AK009778 AK009589 AK009604 AK009924 | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=mm_65297.1 | |tss_id=mm_65297.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9CQD7 | |uniprot_id=Q9CQD7 | ||
}} | }} | ||
Latest revision as of 06:59, 28 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_001037143 |
| Entrez ID: | 641361 |
| Nearest Unigene: | Mm.333661 |
| Nearest Refseq: | NM_001037143 |
| Nearest Ensembl: | ENSMUSG00000011632 |
| Gene Name: | phospholipase A2 inhibitor and LY6/PLAUR domain containing |
| Gene Alias: | 2310033E01Rik |
| Gene Description: | phospholipase A2 inhibitor and LY6/PLAUR domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CTTCTTATAAGG,-,0.00),-32(TCTTATAAGGGC,+,0.00) |
TSS expression
Expression data not found.