TSS: Hg 101084.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-884 |entrez_id=9630 |gc_percent=0.427861 |gene_alias=- |gene_description=G protein subunit alpha 14 |gene_name=GNA14 |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-878 | |||
|end=77649210 | |||
|end_of_center_position=77649200 | |||
|entrez_id=9630 | |entrez_id=9630 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_004297 | |nearest_refseq=NM_004297 | ||
|nearest_unigene=Hs.657795 | |nearest_unigene=Hs.657795 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=77649189 | |||
|start_of_center_position=77649199 | |||
|strand=- | |||
|tata_box=32(TGCTTTTAAAGT,-,0.00),33(GCTTTTAAAGTT,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101084.1 | |tss_id=hg_101084.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 17:57, 12 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -878 |
|---|---|
| Nearest PromoterID: | NM_004297 |
| Entrez ID: | 9630 |
| Nearest Unigene: | Hs.657795 |
| Nearest Refseq: | NM_004297 |
| Nearest Ensembl: | ENSG00000156049 |
| Gene Name: | GNA14 |
| Gene Alias: | - |
| Gene Description: | G protein subunit alpha 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 32(TGCTTTTAAAGT,-,0.00),33(GCTTTTAAAGTT,+,0.00) |