TSS: Hg 101088.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=177676 |entrez_id=2776 |gc_percent=0.358209 |gene_alias=CMC1|G-ALPHA-q|GAQ|SWS |gene_description=G protein subunit alpha q |gene...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|G-ALPHA-q= | |||
|GAQ= | |||
|SWS= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=178038 | |||
|end=77853775 | |||
|end_of_center_position=77853774 | |||
|entrez_id=2776 | |entrez_id=2776 | ||
|gc_percent=0.358209 | |gc_percent=0.358209 | ||
|gene_alias=CMC1 | |gene_alias=CMC1{{!}}G-ALPHA-q{{!}}GAQ{{!}}SWS | ||
|gene_description=G protein subunit alpha q | |gene_description=G protein subunit alpha q | ||
|gene_name=GNAQ | |gene_name=GNAQ | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_002072 | |nearest_refseq=NM_002072 | ||
|nearest_unigene=Hs.269782 | |nearest_unigene=Hs.269782 | ||
|num_trans=0 | |||
|species=human | |||
|start=77853771 | |||
|start_of_center_position=77853773 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101088.1 | |tss_id=hg_101088.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:32, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 178038 |
|---|---|
| Nearest PromoterID: | NM_002072 |
| Entrez ID: | 2776 |
| Nearest Unigene: | Hs.269782 |
| Nearest Refseq: | NM_002072 |
| Nearest Ensembl: | ENSG00000156052 |
| Gene Name: | GNAQ |
| Gene Alias: | CMC1|G-ALPHA-q|GAQ|SWS |
| Gene Description: | G protein subunit alpha q |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.358209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |