TSS: Mm 88396.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1339962 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_080845 | |nearest_refseq=NM_080845 | ||
|nearest_unigene=Mm.36278 | |nearest_unigene=Mm.36278 | ||
|num_trans= | |num_trans=14317 | ||
|species=mouse | |species=mouse | ||
|start=76575640 | |start=76575640 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=-32(AGGTATAAAGGC,-,0.00) | |tata_box=-32(AGGTATAAAGGC,-,0.00) | ||
|transcript_name=ENSMUST00000001183.7 ENSMUST00000137347.7 | |transcript_name=ENSMUST00000001183.7 ENSMUST00000137347.7 AK165414 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_88396.1 | |tss_id=mm_88396.1 | ||
Latest revision as of 15:24, 28 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NM_080845 |
| Entrez ID: | 14317 |
| Nearest Unigene: | Mm.36278 |
| Nearest Refseq: | NM_080845 |
| Nearest Ensembl: | ENSMUSG00000001155 |
| Gene Name: | formiminotransferase cyclodeaminase |
| Gene Alias: | - |
| Gene Description: | formiminotransferase cyclodeaminase |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(AGGTATAAAGGC,-,0.00) |
TSS expression
Expression data not found.