TSS: Mm 97880.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=ENSMUST00000216233.1:0 ENSMUST00000214346.1:0 AK136560:0 AK079892:0 AK079857:0 LF229473:55 MA465050:55 LF229471:-179 MA465048:-179 LF229474:202 MA465051:202 ENSMUST00000142709.1:-291
|all_trans=MGI:2144254 MGI:3651774
|chr=chr11
|chr=chr11
|cpg_percent=0.02
|cpg_percent=0.02
Line 22: Line 22:
|nearest_refseq=NR_015519
|nearest_refseq=NR_015519
|nearest_unigene=Mm.295569
|nearest_unigene=Mm.295569
|num_trans=12
|num_trans=100043636
|species=mouse
|species=mouse
|start=83224439
|start=83224439

Latest revision as of 18:51, 28 July 2021

Basic information about the TSS

TSS ID:mm_97880.1
Species:mouse
Chr:chr11
Start:83224439
End:83224491
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation

Transcript_name:ENSMUST00000216233.1 ENSMUST00000214346.1 AK136560 AK079892 AK079857
Distance:0
GeneID:100043636
HGNC/MGI_ID:MGI:2144254 MGI:3651774
UniProt_ID:
Gene_name:expressed sequence AI662270; predicted gene 11427
Gene_symbol:AI662270 Gm11427
Gene_synonyms:
Gene_source:MGI:2144254 MGI:3651774



TATA-Box annotation

Distance to TSS:889
Nearest PromoterID:NR_015519
Entrez ID:100043636
Nearest Unigene:Mm.295569
Nearest Refseq:NR_015519
Nearest Ensembl:ENSMUSG00000087107
Gene Name:expressed sequence AI662270; predicted gene 11427
Gene Alias:AW496474
Gene Description:expressed sequence AI662270
Gene Type:ncRNA
CpG%:0.02
GC%:0.432836
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

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