TSS: Hg 101112.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=63324 |entrez_id=101927477 |gc_percent=0.447761 |gene_alias=XLOC_000303 |gene_description=long intergenic non-protein coding RNA 15...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=DQ598624:221 DQ582191:-272 DQ590344:-303 | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=221 | |||
|distance_to_tss=63324 | |distance_to_tss=63324 | ||
|end=79887865 | |||
|end_of_center_position=79887854 | |||
|entrez_id=101927477 | |entrez_id=101927477 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
Line 12: | Line 17: | ||
|nearest_refseq=NR_121212 | |nearest_refseq=NR_121212 | ||
|nearest_unigene=Hs.571630 | |nearest_unigene=Hs.571630 | ||
|num_trans=3 | |||
|species=human | |||
|start=79887842 | |||
|start_of_center_position=79887853 | |||
|strand=- | |||
|transcript_name=DQ598624 | |||
|tss_classification=no | |||
|tss_id=hg_101112.1 | |tss_id=hg_101112.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 08:17, 11 May 2019
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 63324 |
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Nearest PromoterID: | NR_121213 |
Entrez ID: | 101927477 |
Nearest Unigene: | Hs.571630 |
Nearest Refseq: | NR_121212 |
Nearest Ensembl: | |
Gene Name: | LINC01507 |
Gene Alias: | XLOC_000303 |
Gene Description: | long intergenic non-protein coding RNA 1507 |
Gene Type: | ncRNA |
CpG%: | 0 |
GC%: | 0.447761 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |