TSS: Hg 10112.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=13994 |entrez_id=473 |gc_percent=0.378109 |gene_alias=ARG|ARP|ATN1L|DNB1|NEDBEH |gene_description=arginine-glutamic acid dipept...") |
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{{TSSDetail | {{TSSDetail | ||
|ARP= | |||
|ATN1L= | |||
|DNB1= | |||
|NEDBEH= | |||
|chr=chr1 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=14139 | |||
|end=8409704 | |||
|end_of_center_position=8409693 | |||
|entrez_id=473 | |entrez_id=473 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
|gene_alias=ARG | |gene_alias=ARG{{!}}ARP{{!}}ATN1L{{!}}DNB1{{!}}NEDBEH | ||
|gene_description=arginine-glutamic acid dipeptide repeats | |gene_description=arginine-glutamic acid dipeptide repeats | ||
|gene_name=RERE | |gene_name=RERE | ||
| Line 12: | Line 20: | ||
|nearest_refseq=NM_012102 | |nearest_refseq=NM_012102 | ||
|nearest_unigene=Hs.463041 | |nearest_unigene=Hs.463041 | ||
|num_trans=0 | |||
|species=human | |||
|start=8409681 | |||
|start_of_center_position=8409692 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10112.1 | |tss_id=hg_10112.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:32, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 14139 |
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| Nearest PromoterID: | NM_001042682 |
| Entrez ID: | 473 |
| Nearest Unigene: | Hs.463041 |
| Nearest Refseq: | NM_012102 |
| Nearest Ensembl: | ENSG00000142599 |
| Gene Name: | RERE |
| Gene Alias: | ARG|ARP|ATN1L|DNB1|NEDBEH |
| Gene Description: | arginine-glutamic acid dipeptide repeats |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |