TSS: Hg 101127.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=306 |entrez_id=158158 |gc_percent=0.791045 |gene_alias=RAB45 |gene_description=RAS and EF-hand domain containing |gene_name=RAS...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=KJ895699:-38 AK290986:-41 BC023566:-299 ENST00000376447.4:-313 NM_152573:-313 ENST00000340717.4:-348 LP896550:-348 AK056176:-348 | |||
|chr=chr9 | |||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance_to_tss= | |distance=-38 | ||
|distance_to_tss=320 | |||
|end=83062829 | |||
|end_of_center_position=83062822 | |||
|entrez_id=158158 | |entrez_id=158158 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_152573 | |nearest_refseq=NM_152573 | ||
|nearest_unigene=Hs.129136 | |nearest_unigene=Hs.129136 | ||
|num_trans=8 | |||
|species=human | |||
|start=83062814 | |||
|start_of_center_position=83062821 | |||
|strand=- | |||
|transcript_name=KJ895699 | |||
|tss_classification=yes | |||
|tss_id=hg_101127.1 | |tss_id=hg_101127.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:32, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 320 |
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| Nearest PromoterID: | NM_152573 |
| Entrez ID: | 158158 |
| Nearest Unigene: | Hs.129136 |
| Nearest Refseq: | NM_152573 |
| Nearest Ensembl: | ENSG00000165105 |
| Gene Name: | RASEF |
| Gene Alias: | RAB45 |
| Gene Description: | RAS and EF-hand domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |