TSS: Hg 101142.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-34290 |entrez_id=105376114 |gc_percent=0.368159 |gene_alias=- |gene_description=uncharacterized LOC105376114 |gene_name=LOC1053...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=NA | |||
|distance_to_tss=-34290 | |distance_to_tss=-34290 | ||
|end=83673547 | |||
|end_of_center_position=83673546 | |||
|entrez_id=105376114 | |entrez_id=105376114 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_135839 | |nearest_refseq=NR_135839 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=83673543 | |||
|start_of_center_position=83673545 | |||
|strand=- | |||
|tata_box=-6(TTTTTAAAAGAC,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101142.1 | |tss_id=hg_101142.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:33, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -34290 |
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| Nearest PromoterID: | NR_135839 |
| Entrez ID: | 105376114 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NR_135839 |
| Nearest Ensembl: | ENSG00000254473 |
| Gene Name: | LOC105376114 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376114 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -6(TTTTTAAAAGAC,+,0.00) |