TSS: Hg 101145.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-29329 |entrez_id=105376114 |gc_percent=0.502488 |gene_alias=- |gene_description=uncharacterized LOC105376114 |gene_name=LOC1053...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=NA | |||
|distance_to_tss=-29329 | |distance_to_tss=-29329 | ||
|end=83678510 | |||
|end_of_center_position=83678507 | |||
|entrez_id=105376114 | |entrez_id=105376114 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_135839 | |nearest_refseq=NR_135839 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=83678502 | |||
|start_of_center_position=83678506 | |||
|strand=- | |||
|tata_box=6(GCTTTAAGGCGC,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101145.1 | |tss_id=hg_101145.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:33, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -29329 |
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| Nearest PromoterID: | NR_135839 |
| Entrez ID: | 105376114 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NR_135839 |
| Nearest Ensembl: | ENSG00000254473 |
| Gene Name: | LOC105376114 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376114 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 6(GCTTTAAGGCGC,+,0.00) |