TSS: Hg 232476.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK308861:0 AK309016:197 |chr=chr10 |cpg_percent=0.03 |distance=0 |distance_to_tss=-197 |end=93703156 |entrez_id=118924 |gc_percent=0.432836 |gene_alias=...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans= | |F26C11.1-like= | ||
|FRA10A= | |||
|all_trans= | |||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |distance=-136 | ||
|distance_to_tss=-197 | |distance_to_tss=-197 | ||
|end= | |end=96832322 | ||
|end_of_center_position=96832314 | |||
|entrez_id=118924 | |entrez_id=118924 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
|gene_alias=C10orf4 | |gene_alias=C10orf4{{!}}F26C11.1-like{{!}}FRA10A | ||
|gene_description=FRA10A associated CGG repeat 1 | |gene_description=FRA10A associated CGG repeat 1 | ||
|gene_id= | |gene_id=102723665 | ||
|gene_name= | |gene_name=uncharacterized LOC102723665 | ||
|gene_source= | |gene_source=EntrezGene:102723665 | ||
|gene_symbol= | |gene_symbol=LOC102723665 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000148690 | |nearest_ensembl=ENSG00000148690 | ||
|nearest_promoter_id=NM_001347714 | |nearest_promoter_id=NM_001347714 | ||
|nearest_refseq=NM_145246 | |nearest_refseq=NM_145246 | ||
|nearest_unigene=Hs.586650 | |nearest_unigene=Hs.586650 | ||
|num_trans= | |num_trans=102723665 | ||
|species=human | |species=human | ||
|start= | |start=96832305 | ||
|start_of_center_position=96832313 | |||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=AB593180 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232476.1 | |tss_id=hg_232476.1 | ||
Latest revision as of 11:11, 21 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -197 |
|---|---|
| Nearest PromoterID: | NM_001347714 |
| Entrez ID: | 118924 |
| Nearest Unigene: | Hs.586650 |
| Nearest Refseq: | NM_145246 |
| Nearest Ensembl: | ENSG00000148690 |
| Gene Name: | uncharacterized LOC102723665 |
| Gene Alias: | C10orf4|F26C11.1-like|FRA10A |
| Gene Description: | FRA10A associated CGG repeat 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.