TSS: Hg 233013.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |WDR94= | ||
|all_trans=HGNC:7710 | |||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=19 | ||
|distance_to_tss=52 | |distance_to_tss=52 | ||
|end= | |end=47579010 | ||
|end_of_center_position=47579010 | |||
|entrez_id=55626 | |entrez_id=55626 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
|gene_alias=DCAF3 | |gene_alias=DCAF3{{!}}WDR94 | ||
|gene_description=autophagy and beclin 1 regulator 1 | |gene_description=autophagy and beclin 1 regulator 1 | ||
|gene_id= | |gene_id=4722 | ||
|gene_name= | |gene_name=NADH:ubiquinone oxidoreductase core subunit S3 | ||
|gene_source=HGNC: | |gene_source=HGNC:7710 | ||
|gene_symbol= | |gene_symbol=NDUFS3 | ||
|gene_synonyms= | |gene_synonyms=CI-30 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC: | |hgnc_mgi_id=HGNC:7710 | ||
|nearest_ensembl=ENSG00000110497 | |nearest_ensembl=ENSG00000110497 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001367468 | ||
|nearest_refseq=NM_017749 | |nearest_refseq=NM_017749 | ||
|nearest_unigene=Hs.654644 | |nearest_unigene=Hs.654644 | ||
|num_trans= | |num_trans=4722 | ||
|species=human | |species=human | ||
|start= | |start=47579009 | ||
|strand= | |start_of_center_position=47579009 | ||
|tata_box= | |strand=+ | ||
|transcript_name= | |tata_box=32(GTTTTTATGGTA,+,0.00) | ||
|tss_classification= | |transcript_name=ENST00000529276.1 | ||
|tss_classification=yes | |||
|tss_id=hg_233013.1 | |tss_id=hg_233013.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=E9PJE7 | ||
}} | }} | ||
Latest revision as of 11:23, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 52 |
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| Nearest PromoterID: | NM_001367468 |
| Entrez ID: | 55626 |
| Nearest Unigene: | Hs.654644 |
| Nearest Refseq: | NM_017749 |
| Nearest Ensembl: | ENSG00000110497 |
| Gene Name: | NADH:ubiquinone oxidoreductase core subunit S3 |
| Gene Alias: | DCAF3|WDR94 |
| Gene Description: | autophagy and beclin 1 regulator 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 32(GTTTTTATGGTA,+,0.00) |
TSS expression
Expression data not found.