TSS: Hg 233019.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0 |distance= |distance_to_tss=36858 |end=46809451 |entrez_id=9793 |gc_percent=0.298507 |gene_alias=CHTOG|MSPS|TOG|TOGp|ch-TOG |gene_descrip...") |
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{{TSSDetail | {{TSSDetail | ||
|MSPS= | |||
|TOG= | |||
|TOGp= | |||
|all_trans=HGNC:14697 | |||
|ch-TOG= | |||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=-128 | ||
|distance_to_tss= | |distance_to_tss=36830 | ||
|end= | |end=48325048 | ||
|end_of_center_position=48325048 | |||
|entrez_id=9793 | |entrez_id=9793 | ||
|gc_percent=0.298507 | |gc_percent=0.298507 | ||
|gene_alias=CHTOG | |gene_alias=CHTOG{{!}}MSPS{{!}}TOG{{!}}TOGp{{!}}ch-TOG | ||
|gene_description=cytoskeleton associated protein 5 | |gene_description=cytoskeleton associated protein 5 | ||
|gene_name= | |gene_id=256144 | ||
|gene_name=olfactory receptor family 4 subfamily C member 3 | |||
|gene_source=HGNC:14697 | |||
|gene_symbol=OR4C3 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:14697 | |||
|nearest_ensembl=ENSG00000175216 | |nearest_ensembl=ENSG00000175216 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001008938 | ||
|nearest_refseq=NM_014756 | |nearest_refseq=NM_014756 | ||
|nearest_unigene=Hs.201253 | |nearest_unigene=Hs.201253 | ||
|num_trans= | |num_trans=256144 | ||
|species=human | |species=human | ||
|start= | |start=48325047 | ||
|start_of_center_position=48325047 | |||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-4(GCTTCTAAAAGC,-,0.00),75(CCTTAAAAATGC,+,0.00) | ||
|transcript_name= | |transcript_name=ENST00000319856.5 BC136853 BC136854 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233019.1 | |tss_id=hg_233019.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A126GW65 Q8NH37 | |||
}} | }} | ||
Latest revision as of 11:23, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 36830 |
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| Nearest PromoterID: | NM_001008938 |
| Entrez ID: | 9793 |
| Nearest Unigene: | Hs.201253 |
| Nearest Refseq: | NM_014756 |
| Nearest Ensembl: | ENSG00000175216 |
| Gene Name: | olfactory receptor family 4 subfamily C member 3 |
| Gene Alias: | CHTOG|MSPS|TOG|TOGp|ch-TOG |
| Gene Description: | cytoskeleton associated protein 5 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.298507 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -4(GCTTCTAAAAGC,-,0.00),75(CCTTAAAAATGC,+,0.00) |
TSS expression
Expression data not found.