TSS: Hg 101170.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CSBP= | |||
|HNRPK= | |||
|TUNP= | |||
|chr=chr9 | |||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=636 | |||
|end=83979587 | |||
|end_of_center_position=83979580 | |||
|entrez_id=3190 | |entrez_id=3190 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=AUKS | |gene_alias=AUKS{{!}}CSBP{{!}}HNRPK{{!}}TUNP | ||
|gene_description=heterogeneous nuclear ribonucleoprotein K | |gene_description=heterogeneous nuclear ribonucleoprotein K | ||
|gene_name=HNRNPK | |gene_name=HNRNPK | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000165119 | |nearest_ensembl=ENSG00000165119 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_031263 | ||
|nearest_refseq=NM_002140 | |nearest_refseq=NM_002140 | ||
|nearest_unigene=Hs.522257 | |nearest_unigene=Hs.522257 | ||
|num_trans=0 | |||
|species=human | |||
|start=83979571 | |||
|start_of_center_position=83979579 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_101170.1 | |tss_id=hg_101170.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:33, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 636 |
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| Nearest PromoterID: | NM_031263 |
| Entrez ID: | 3190 |
| Nearest Unigene: | Hs.522257 |
| Nearest Refseq: | NM_002140 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | HNRNPK |
| Gene Alias: | AUKS|CSBP|HNRPK|TUNP |
| Gene Description: | heterogeneous nuclear ribonucleoprotein K |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |