TSS: Hg 101175.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=43474 |entrez_id=64078 |gc_percent=0.40796 |gene_alias=CNT3 |gene_description=solute carrier family 28 member 3 |gene_name=SLC2...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=43453 | |||
|end=84297313 | |||
|end_of_center_position=84297306 | |||
|entrez_id=64078 | |entrez_id=64078 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
Line 12: | Line 16: | ||
|nearest_refseq=NM_022127 | |nearest_refseq=NM_022127 | ||
|nearest_unigene=Hs.535966 | |nearest_unigene=Hs.535966 | ||
|num_trans=0 | |||
|species=human | |||
|start=84297297 | |||
|start_of_center_position=84297305 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101175.1 | |tss_id=hg_101175.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 43453 |
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Nearest PromoterID: | NM_001199633 |
Entrez ID: | 64078 |
Nearest Unigene: | Hs.535966 |
Nearest Refseq: | NM_022127 |
Nearest Ensembl: | ENSG00000197506 |
Gene Name: | SLC28A3 |
Gene Alias: | CNT3 |
Gene Description: | solute carrier family 28 member 3 |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.40796 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |