TSS: Hg 101182.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=297084 |entrez_id=4915 |gc_percent=0.457711 |gene_alias=GP145-TrkB|TRKB|trk-B |gene_description=neurotrophic receptor tyrosine k...") |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TRKB= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=261560 | |||
|end=84967463 | |||
|end_of_center_position=84967462 | |||
|entrez_id=4915 | |entrez_id=4915 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
|gene_alias=GP145-TrkB | |gene_alias=EIEE58{{!}}GP145-TrkB{{!}}OBHD{{!}}TRKB{{!}}trk-B | ||
|gene_description=neurotrophic receptor tyrosine kinase 2 | |gene_description=neurotrophic receptor tyrosine kinase 2 | ||
|gene_name=NTRK2 | |gene_name=NTRK2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148053 | |nearest_ensembl=ENSG00000148053 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001369552 | ||
|nearest_refseq=NM_006180 | |nearest_refseq=NM_006180 | ||
|nearest_unigene=Hs.494312 | |nearest_unigene=Hs.494312 | ||
|num_trans=0 | |||
|species=human | |||
|start=84967459 | |||
|start_of_center_position=84967461 | |||
|strand=- | |||
|transcript_name= | |||
|trk-B= | |||
|tss_classification=no | |||
|tss_id=hg_101182.1 | |tss_id=hg_101182.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 261560 |
---|---|
Nearest PromoterID: | NM_001369552 |
Entrez ID: | 4915 |
Nearest Unigene: | Hs.494312 |
Nearest Refseq: | NM_006180 |
Nearest Ensembl: | ENSG00000148053 |
Gene Name: | NTRK2 |
Gene Alias: | EIEE58|GP145-TrkB|OBHD|TRKB|trk-B |
Gene Description: | neurotrophic receptor tyrosine kinase 2 |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.457711 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |