TSS: Hg 101188.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=74127 |entrez_id=23287 |gc_percent=0.278607 |gene_alias=CCP1|NNA1 |gene_description=ATP/GTP binding protein 1 |gene_name=AGTPBP1...") |
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{{TSSDetail | {{TSSDetail | ||
|NNA1= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=NA | |||
|distance_to_tss=74127 | |distance_to_tss=74127 | ||
|end=85667904 | |||
|end_of_center_position=85667903 | |||
|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.278607 | |gc_percent=0.278607 | ||
|gene_alias=CCP1 | |gene_alias=CCP1{{!}}CONDCA{{!}}NNA1 | ||
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
|gene_name=AGTPBP1 | |gene_name=AGTPBP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001286717 | ||
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
|num_trans=0 | |||
|species=human | |||
|start=85667900 | |||
|start_of_center_position=85667902 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101188.1 | |tss_id=hg_101188.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 74127 |
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| Nearest PromoterID: | NM_001286717 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | AGTPBP1 |
| Gene Alias: | CCP1|CONDCA|NNA1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.278607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |