TSS: Hg 101196.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=63853 |entrez_id=51280 |gc_percent=0.497512 |gene_alias=C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 |gene_description=golgi me...") |
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{{TSSDetail | {{TSSDetail | ||
|GOLPH2= | |||
|GP73= | |||
|HEL46= | |||
|PSEC0257= | |||
|all_trans=DQ580437:122 AK074188:155 | |||
|bA379P1.3= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss= | |distance=122 | ||
|distance_to_tss=63816 | |||
|end=86035748 | |||
|end_of_center_position=86035743 | |||
|entrez_id=51280 | |entrez_id=51280 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=C9orf155 | |gene_alias=C9orf155{{!}}GOLPH2{{!}}GP73{{!}}HEL46{{!}}PSEC0257{{!}}bA379P1.3 | ||
|gene_description=golgi membrane protein 1 | |gene_description=golgi membrane protein 1 | ||
|gene_name=GOLM1 | |gene_name=GOLM1 | ||
| Line 12: | Line 22: | ||
|nearest_refseq=NM_016548 | |nearest_refseq=NM_016548 | ||
|nearest_unigene=Hs.494337 | |nearest_unigene=Hs.494337 | ||
|num_trans=2 | |||
|species=human | |||
|start=86035736 | |||
|start_of_center_position=86035742 | |||
|strand=- | |||
|transcript_name=DQ580437 | |||
|tss_classification=yes | |||
|tss_id=hg_101196.1 | |tss_id=hg_101196.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 63816 |
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| Nearest PromoterID: | NM_016548 |
| Entrez ID: | 51280 |
| Nearest Unigene: | Hs.494337 |
| Nearest Refseq: | NM_016548 |
| Nearest Ensembl: | ENSG00000135052 |
| Gene Name: | GOLM1 |
| Gene Alias: | C9orf155|GOLPH2|GP73|HEL46|PSEC0257|bA379P1.3 |
| Gene Description: | golgi membrane protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |