TSS: Hg 114228.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|HSPC252= | |||
|all_trans=HGNC:7710 | |||
|chr=chr11 | |||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance_to_tss=- | |distance=0 | ||
|entrez_id= | |distance_to_tss=-6 | ||
|end=47579090 | |||
|end_of_center_position=47579069 | |||
|entrez_id=4722 | |||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias= | |gene_alias=CI-30{{!}}MC1DN8 | ||
| | |gene_description=NADH:ubiquinone oxidoreductase core subunit S3 | ||
|gene_name= | |gene_id=4722 | ||
|gene_name=NADH:ubiquinone oxidoreductase core subunit S3 | |||
|gene_source=HGNC:7710 | |||
|gene_symbol=NDUFS3 | |||
|gene_synonyms=CI-30 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl= | |hgnc_mgi_id=HGNC:7710 | ||
|nearest_promoter_id= | |nearest_ensembl=ENSG00000213619 | ||
|nearest_refseq= | |nearest_promoter_id=NM_004551 | ||
|nearest_unigene=Hs. | |nearest_refseq=NM_004551 | ||
|nearest_unigene=Hs.502528 | |||
|num_trans=4722 | |||
|species=human | |||
|start=47579046 | |||
|start_of_center_position=47579068 | |||
|strand=+ | |||
|transcript_name=ENST00000530295.5 ENST00000534208.5 ENST00000534716.2 ENST00000263774.9 ENST00000533105.1 BC000617 AK313802 AK223255 AF067139 AF100743 AK294167 | |||
|tss_classification=yes | |||
|tss_id=hg_114228.1 | |tss_id=hg_114228.1 | ||
|tss_score=1 | |||
|uniprot_id=E9PKL8 G3V194 O75489 Q53FM7 | |||
}} | }} | ||
Latest revision as of 22:42, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -6 |
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| Nearest PromoterID: | NM_004551 |
| Entrez ID: | 4722 |
| Nearest Unigene: | Hs.502528 |
| Nearest Refseq: | NM_004551 |
| Nearest Ensembl: | ENSG00000213619 |
| Gene Name: | NADH:ubiquinone oxidoreductase core subunit S3 |
| Gene Alias: | CI-30|MC1DN8 |
| Gene Description: | NADH:ubiquinone oxidoreductase core subunit S3 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.