TSS: Hg 101222.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-14630 |entrez_id=79670 |gc_percent=0.477612 |gene_alias=PAPD6|TUT7 |gene_description=zinc finger CCHC-type containing 6 |gene_n...") |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TUT7= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-14707 | |||
|end=86369122 | |||
|end_of_center_position=86369117 | |||
|entrez_id=79670 | |entrez_id=79670 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
|gene_alias=PAPD6 | |gene_alias=PAPD6{{!}}TENT3B{{!}}ZCCHC6 | ||
|gene_description= | |gene_description=terminal uridylyl transferase 7 | ||
|gene_name= | |gene_name=TUT7 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000083223 | |nearest_ensembl=ENSG00000083223 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_024617 | ||
|nearest_refseq=NM_024617 | |nearest_refseq=NM_024617 | ||
|nearest_unigene=Hs.597057 | |nearest_unigene=Hs.597057 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=86369111 | |||
|start_of_center_position=86369116 | |||
|strand=- | |||
|tata_box=-35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00) | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_101222.1 | |tss_id=hg_101222.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:35, 15 June 2021
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -14707 |
---|---|
Nearest PromoterID: | NM_024617 |
Entrez ID: | 79670 |
Nearest Unigene: | Hs.597057 |
Nearest Refseq: | NM_024617 |
Nearest Ensembl: | ENSG00000083223 |
Gene Name: | TUT7 |
Gene Alias: | PAPD6|TENT3B|ZCCHC6 |
Gene Description: | terminal uridylyl transferase 7 |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.477612 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(CTCCTTAAAAAC,-,0.00),-33(CCTTAAAAACCC,+,0.00) |