TSS: Hg 242563.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr7 |cpg_percent=0.025 |distance= |distance_to_tss=1493 |end=150340184 |entrez_id=5919 |gc_percent=0.59204 |gene_alias=HP10433|TIG2 |gene_description=retinoi...") |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TIG2= | |||
|all_trans=HGNC:17495 | |||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |distance=3 | ||
|distance_to_tss= | |distance_to_tss=1448 | ||
|end= | |end=99929623 | ||
|end_of_center_position=99929623 | |||
|entrez_id=5919 | |entrez_id=5919 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=HP10433 | |gene_alias=HP10433{{!}}TIG2 | ||
|gene_description=retinoic acid receptor responder 2 | |gene_description=retinoic acid receptor responder 2 | ||
|gene_name= | |gene_id=349149 | ||
|gene_name=gap junction protein gamma 3 | |||
|gene_source=HGNC:17495 | |||
|gene_symbol=GJC3 | |||
|gene_synonyms=CX30.2 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:17495 | |||
|nearest_ensembl=ENSG00000106538 | |nearest_ensembl=ENSG00000106538 | ||
|nearest_promoter_id=NM_002889 | |nearest_promoter_id=NM_002889 | ||
|nearest_refseq=NM_002889 | |nearest_refseq=NM_002889 | ||
|nearest_unigene=Hs.647064 | |nearest_unigene=Hs.647064 | ||
|num_trans= | |num_trans=349149 | ||
|species=human | |species=human | ||
|start= | |start=99929622 | ||
|strand= | |start_of_center_position=99929622 | ||
|transcript_name= | |strand=- | ||
|transcript_name=ENST00000312891.3 AF503615 AY297109 BC148670 BC156594 AB528858 | |||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242563.1 | |tss_id=hg_242563.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q8NFK1 | |||
}} | }} | ||
Latest revision as of 14:50, 21 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 1448 |
|---|---|
| Nearest PromoterID: | NM_002889 |
| Entrez ID: | 5919 |
| Nearest Unigene: | Hs.647064 |
| Nearest Refseq: | NM_002889 |
| Nearest Ensembl: | ENSG00000106538 |
| Gene Name: | gap junction protein gamma 3 |
| Gene Alias: | HP10433|TIG2 |
| Gene Description: | retinoic acid receptor responder 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.